LICENSE
MANIFEST.in
README.md
setup.cfg
setup.py
versioneer.py
q2_cutadapt/__init__.py
q2_cutadapt/_demux.py
q2_cutadapt/_examples.py
q2_cutadapt/_trim.py
q2_cutadapt/_version.py
q2_cutadapt/citations.bib
q2_cutadapt/plugin_setup.py
q2_cutadapt.egg-info/PKG-INFO
q2_cutadapt.egg-info/SOURCES.txt
q2_cutadapt.egg-info/dependency_links.txt
q2_cutadapt.egg-info/entry_points.txt
q2_cutadapt.egg-info/not-zip-safe
q2_cutadapt.egg-info/top_level.txt
q2_cutadapt/tests/__init__.py
q2_cutadapt/tests/test_demux.py
q2_cutadapt/tests/test_trim.py
q2_cutadapt/tests/data/forward.fastq.gz
q2_cutadapt/tests/data/reverse.fastq.gz
q2_cutadapt/tests/data/test_data_quality.fastq
q2_cutadapt/tests/data/variable_length.fastq.gz
q2_cutadapt/tests/data/dual-index-mixed-orientation/forward.fastq.gz
q2_cutadapt/tests/data/dual-index-mixed-orientation/reverse.fastq.gz
q2_cutadapt/tests/data/mixed-orientation/forward.fastq.gz
q2_cutadapt/tests/data/mixed-orientation/reverse.fastq.gz
q2_cutadapt/tests/data/paired-end/MANIFEST
q2_cutadapt/tests/data/paired-end/metadata.yml
q2_cutadapt/tests/data/paired-end/sample_a_S01_L001_R1_001.fastq.gz
q2_cutadapt/tests/data/paired-end/sample_a_S01_L001_R2_001.fastq.gz
q2_cutadapt/tests/data/paired-end/sample_b_S02_L001_R1_001.fastq.gz
q2_cutadapt/tests/data/paired-end/sample_b_S02_L001_R2_001.fastq.gz
q2_cutadapt/tests/data/paired-end/sample_c_S03_L001_R1_001.fastq.gz
q2_cutadapt/tests/data/paired-end/sample_c_S03_L001_R2_001.fastq.gz
q2_cutadapt/tests/data/paired-end-unordered/MANIFEST
q2_cutadapt/tests/data/paired-end-unordered/metadata.yml
q2_cutadapt/tests/data/paired-end-unordered/sample_a_S01_L001_R1_001.fastq.gz
q2_cutadapt/tests/data/paired-end-unordered/sample_a_S01_L001_R2_001.fastq.gz
q2_cutadapt/tests/data/paired-end-unordered/sample_b_S00_L001_R2_001.fastq.gz
q2_cutadapt/tests/data/paired-end-unordered/sample_b_S02_L001_R1_001.fastq.gz
q2_cutadapt/tests/data/single-end/MANIFEST
q2_cutadapt/tests/data/single-end/metadata.yml
q2_cutadapt/tests/data/single-end/sample_a_S01_L001_R1_001.fastq.gz
q2_cutadapt/tests/data/single-end/sample_b_S02_L001_R1_001.fastq.gz
q2_cutadapt/tests/data/single-end/sample_c_S03_L001_R1_001.fastq.gz
q2_cutadapt/tests/data/single-end-quality/MANIFEST
q2_cutadapt/tests/data/single-end-quality/metadata.yml
q2_cutadapt/tests/data/single-end-quality/quality_sample_a_S01_L001_R1_001.fastq.gz